The only time I have had something similar happen to me is when I switched from Chronium to x84-64 - Testing 64-Bit Builds. All I did to revert this was switch back from x84-64 to either Chornium or plain GMOD. Not sure if you are using any of the beta options, if so just switch back to plain GMOD and see if that makes a difference.
Like gm1003 said if it doesn't affect performance then it shouldn't be too much of an issue however if you want to use logs for reporting or something then it would be a good idea to attempt to fix this.
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